Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Syne3Q4FZC9 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Syne3Q4FZC9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm7150-201ENSMUST00000122032 981 ntBASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm6439-201ENSMUST00000199849 862 ntBASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm9555-201ENSMUST00000200908 583 ntBASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm43966-201ENSMUST00000203301 612 ntBASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Syne3Q4FZC9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm22144-201ENSMUST00000157402 102 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Mir7686-201ENSMUST00000200604 57 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.98□□□□□ -0.49
Syne3Q4FZC9 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Syne3Q4FZC9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Syne3Q4FZC9 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms