Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cul4aQ3TCH7 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm21778-201ENSMUST00000178779 471 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm45186-201ENSMUST00000206874 478 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cul4aQ3TCH7 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm24891-201ENSMUST00000104391 136 ntBASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cul4aQ3TCH7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms