Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Chrna5Q2MKA5 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm8756-201ENSMUST00000183250 929 ntBASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm43966-201ENSMUST00000203301 612 ntBASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm18123-201ENSMUST00000210874 822 ntBASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Chrna5Q2MKA5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Mir744-201ENSMUST00000103261 100 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm5944-201ENSMUST00000118182 1001 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm24943-201ENSMUST00000158329 433 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm5254-201ENSMUST00000188353 977 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm42689-201ENSMUST00000202403 404 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm44640-201ENSMUST00000206894 247 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Chrna5Q2MKA5 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Gm20493-201ENSMUST00000173706 213 ntBASIC13.35□□□□□ -0.27
Chrna5Q2MKA5 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms