Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.78□□□□□ -0.36
GabpaQ00422 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
GabpaQ00422 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.77□□□□□ -0.36
GabpaQ00422 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
GabpaQ00422 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GabpaQ00422 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GabpaQ00422 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
GabpaQ00422 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.77□□□□□ -0.36
GabpaQ00422 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
GabpaQ00422 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
GabpaQ00422 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
GabpaQ00422 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm15003-201ENSMUST00000118884 446 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm11952-201ENSMUST00000121172 821 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Mir7035-201ENSMUST00000184713 82 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC12.77□□□□□ -0.37
GabpaQ00422 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm10020-201ENSMUST00000081993 612 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 Gm8325-201ENSMUST00000099086 453 ntBASIC12.77□□□□□ -0.37
GabpaQ00422 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GabpaQ00422 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GabpaQ00422 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
GabpaQ00422 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
GabpaQ00422 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GabpaQ00422 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GabpaQ00422 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GabpaQ00422 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
GabpaQ00422 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Gm17214-201ENSMUST00000164501 541 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GabpaQ00422 Gm4862-201ENSMUST00000170405 438 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GabpaQ00422 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GabpaQ00422 Snord55-201ENSMUST00000174939 79 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 Gm44647-201ENSMUST00000207402 428 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 Gm18035-201ENSMUST00000211962 589 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GabpaQ00422 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
GabpaQ00422 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
GabpaQ00422 Gm14005-209ENSMUST00000224993 1832 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC12.76□□□□□ -0.37
GabpaQ00422 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
GabpaQ00422 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
GabpaQ00422 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms