Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Pdlim4P70271 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.43□□□□□ -0.9
Pdlim4P70271 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Pdlim4P70271 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Pdlim4P70271 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 CT010447.1-201ENSMUST00000225657 1608 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 n-R5s64-201ENSMUST00000102019 119 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm11956-201ENSMUST00000119525 512 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Mup-ps26-201ENSMUST00000121751 202 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm24844-201ENSMUST00000158679 127 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.42□□□□□ -0.9
Pdlim4P70271 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm42997-202ENSMUST00000200321 985 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.42□□□□□ -0.9
Pdlim4P70271 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm45089-201ENSMUST00000208082 2040 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.42□□□□□ -0.9
Pdlim4P70271 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.42□□□□□ -0.9
Pdlim4P70271 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Pdlim4P70271 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.41□□□□□ -0.9
Pdlim4P70271 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm5740-201ENSMUST00000211003 1857 ntBASIC9.41□□□□□ -0.9
Pdlim4P70271 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.41□□□□□ -0.9
Pdlim4P70271 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Pdlim4P70271 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Pdlim4P70271 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm15352-201ENSMUST00000118696 270 ntBASIC9.41□□□□□ -0.9
Pdlim4P70271 Gm15573-201ENSMUST00000119487 540 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms