Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.57□□□□□ -0.72
Six5P70178 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.57□□□□□ -0.72
Six5P70178 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Six5P70178 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Gm14395-201ENSMUST00000120494 563 ntBASIC10.57□□□□□ -0.72
Six5P70178 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.57□□□□□ -0.72
Six5P70178 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.57□□□□□ -0.72
Six5P70178 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC10.57□□□□□ -0.72
Six5P70178 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Six5P70178 Gm23694-201ENSMUST00000179335 110 ntBASIC10.57□□□□□ -0.72
Six5P70178 Mir6546-201ENSMUST00000184460 62 ntBASIC10.57□□□□□ -0.72
Six5P70178 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.57□□□□□ -0.72
Six5P70178 Mir8115-201ENSMUST00000184992 119 ntBASIC10.57□□□□□ -0.72
Six5P70178 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Gm43058-201ENSMUST00000197645 625 ntBASIC10.57□□□□□ -0.72
Six5P70178 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.57□□□□□ -0.72
Six5P70178 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.57□□□□□ -0.72
Six5P70178 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC10.57□□□□□ -0.72
Six5P70178 Nsd1-205ENSMUST00000224693 852 ntBASIC10.57□□□□□ -0.72
Six5P70178 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.57□□□□□ -0.72
Six5P70178 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Six5P70178 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Six5P70178 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.56□□□□□ -0.72
Six5P70178 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.56□□□□□ -0.72
Six5P70178 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Gm11949-201ENSMUST00000117640 372 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm12218-201ENSMUST00000117666 399 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm15528-201ENSMUST00000117821 864 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Gm25492-201ENSMUST00000157383 129 ntBASIC10.56□□□□□ -0.72
Six5P70178 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Six5P70178 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.56□□□□□ -0.72
Six5P70178 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.56□□□□□ -0.72
Six5P70178 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Mir6979-201ENSMUST00000183927 56 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm3551-201ENSMUST00000190750 664 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm29067-201ENSMUST00000190821 470 ntBASIC10.56□□□□□ -0.72
Six5P70178 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm44315-201ENSMUST00000203041 219 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Six5P70178 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Six5P70178 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Six5P70178 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Six5P70178 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Six5P70178 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Six5P70178 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Six5P70178 Gm45132-201ENSMUST00000207234 2542 ntBASIC10.56□□□□□ -0.72
Six5P70178 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.56□□□□□ -0.72
Six5P70178 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Six5P70178 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms