Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Rpl39P62892 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC7.99□□□□□ -1.13
Rpl39P62892 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC7.99□□□□□ -1.13
Rpl39P62892 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC7.99□□□□□ -1.13
Rpl39P62892 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC7.99□□□□□ -1.13
Rpl39P62892 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Rpl39P62892 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC7.98□□□□□ -1.13
Rpl39P62892 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm8602-201ENSMUST00000184045 607 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Gm3096-201ENSMUST00000185770 364 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm37489-201ENSMUST00000191883 159 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm10608-202ENSMUST00000213924 676 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Gm30285-201ENSMUST00000214614 422 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 AC141438.2-201ENSMUST00000215068 271 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Gm7940-201ENSMUST00000218195 769 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Rpl39P62892 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm8399-201ENSMUST00000082300 1117 ntBASIC7.98□□□□□ -1.13
Rpl39P62892 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC7.98□□□□□ -1.13
Rpl39P62892 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC7.98□□□□□ -1.13
Rpl39P62892 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Rpl39P62892 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Rpl39P62892 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Rpl39P62892 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Rpl39P62892 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms