Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Nup43P59235 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Nup43P59235 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.66□□□□□ -0.7
Nup43P59235 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Nup43P59235 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.65□□□□□ -0.7
Nup43P59235 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nup43P59235 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Nup43P59235 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Gm12218-201ENSMUST00000117666 399 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm15528-201ENSMUST00000117821 864 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm14263-201ENSMUST00000117955 746 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm13422-201ENSMUST00000118834 504 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm8302-201ENSMUST00000119217 852 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.65□□□□□ -0.7
Nup43P59235 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.65□□□□□ -0.7
Nup43P59235 Gm29067-201ENSMUST00000190821 470 ntBASIC10.65□□□□□ -0.7
Nup43P59235 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Gm43058-201ENSMUST00000197645 625 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Gm45770-201ENSMUST00000212105 616 ntBASIC10.65□□□□□ -0.7
Nup43P59235 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.65□□□□□ -0.7
Nup43P59235 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 Gm10179-201ENSMUST00000086233 688 ntBASIC10.65□□□□□ -0.7
Nup43P59235 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Nup43P59235 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.65□□□□□ -0.7
Nup43P59235 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Nup43P59235 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Nup43P59235 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Nup43P59235 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
Nup43P59235 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.65□□□□□ -0.71
Nup43P59235 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Nup43P59235 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Nup43P59235 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Nup43P59235 Gm12029-201ENSMUST00000120073 832 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms