Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.55□□□□□ -0.4
Tpm1P58771 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.55□□□□□ -0.4
Tpm1P58771 Gm44651-201ENSMUST00000207343 372 ntBASIC12.55□□□□□ -0.4
Tpm1P58771 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.55□□□□□ -0.4
Tpm1P58771 Gm18935-201ENSMUST00000212692 664 ntBASIC12.55□□□□□ -0.4
Tpm1P58771 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Tpm1P58771 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC12.55□□□□□ -0.4
Tpm1P58771 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tpm1P58771 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Gm22133-201ENSMUST00000102082 109 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm12241-201ENSMUST00000118330 726 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tpm1P58771 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.54□□□□□ -0.4
Tpm1P58771 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.54□□□□□ -0.4
Tpm1P58771 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm44008-201ENSMUST00000204345 412 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Gm4157-201ENSMUST00000211647 679 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.54□□□□□ -0.4
Tpm1P58771 Gm7940-201ENSMUST00000218195 769 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.54□□□□□ -0.4
Tpm1P58771 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tpm1P58771 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tpm1P58771 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tpm1P58771 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tpm1P58771 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tpm1P58771 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tpm1P58771 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Tpm1P58771 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.53□□□□□ -0.4
Tpm1P58771 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Tpm1P58771 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Tpm1P58771 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.53□□□□□ -0.4
Tpm1P58771 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms