Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm15566-201ENSMUST00000121130 590 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm7150-201ENSMUST00000122032 981 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.27□□□□□ -0.61
Fdft1P53798 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.27□□□□□ -0.61
Fdft1P53798 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.27□□□□□ -0.61
Fdft1P53798 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Gm29199-201ENSMUST00000187766 775 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Gm6108-201ENSMUST00000208365 367 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm5369-201ENSMUST00000217499 588 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.27□□□□□ -0.61
Fdft1P53798 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.27□□□□□ -0.61
Fdft1P53798 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fdft1P53798 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Gm15236-201ENSMUST00000117309 379 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm8731-201ENSMUST00000118088 412 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.26□□□□□ -0.61
Fdft1P53798 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Fdft1P53798 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm29499-201ENSMUST00000189151 486 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm28329-201ENSMUST00000191208 689 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm29171-201ENSMUST00000191397 486 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm37246-201ENSMUST00000192665 835 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.26□□□□□ -0.61
Fdft1P53798 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Fdft1P53798 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fdft1P53798 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Fdft1P53798 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.25□□□□□ -0.61
Fdft1P53798 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.25□□□□□ -0.61
Fdft1P53798 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fdft1P53798 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms