Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.2□□□□□ -0.78
Rfx3P48381 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.2□□□□□ -0.78
Rfx3P48381 Gm2965-201ENSMUST00000198365 343 ntBASIC10.2□□□□□ -0.78
Rfx3P48381 Gm43966-201ENSMUST00000203301 612 ntBASIC10.2□□□□□ -0.78
Rfx3P48381 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.2□□□□□ -0.78
Rfx3P48381 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.2□□□□□ -0.78
Rfx3P48381 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.2□□□□□ -0.78
Rfx3P48381 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Rfx3P48381 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Rfx3P48381 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.19□□□□□ -0.78
Rfx3P48381 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.19□□□□□ -0.78
Rfx3P48381 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Gm16505-201ENSMUST00000179981 232 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Gm8100-201ENSMUST00000182906 988 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Gm45575-201ENSMUST00000210283 548 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.19□□□□□ -0.78
Rfx3P48381 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
Rfx3P48381 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.19□□□□□ -0.78
Rfx3P48381 AC151275.1-201ENSMUST00000224870 585 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Rfx3P48381 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Gm10288-201ENSMUST00000084614 537 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.19□□□□□ -0.78
Rfx3P48381 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Rfx3P48381 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.19□□□□□ -0.78
Rfx3P48381 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Rfx3P48381 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.19□□□□□ -0.78
Rfx3P48381 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rfx3P48381 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Rfx3P48381 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.18□□□□□ -0.78
Rfx3P48381 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Rfx3P48381 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Rfx3P48381 Erich3-203ENSMUST00000189969 3460 ntBASIC10.18□□□□□ -0.78
Rfx3P48381 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Rfx3P48381 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms