Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pbx1P41778 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pbx1P41778 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pbx1P41778 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pbx1P41778 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pbx1P41778 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pbx1P41778 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm11941-201ENSMUST00000119904 610 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.09□□□□□ -0.47
Pbx1P41778 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.09□□□□□ -0.47
Pbx1P41778 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm25492-201ENSMUST00000157383 129 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Gm24990-201ENSMUST00000157406 323 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 AU022133-201ENSMUST00000200601 873 ntBASIC12.09□□□□□ -0.47
Pbx1P41778 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.09□□□□□ -0.47
Pbx1P41778 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pbx1P41778 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pbx1P41778 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pbx1P41778 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pbx1P41778 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pbx1P41778 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pbx1P41778 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Pbx1P41778 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pbx1P41778 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Gm24891-201ENSMUST00000104391 136 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Gm14193-201ENSMUST00000105067 153 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC12.08□□□□□ -0.48
Pbx1P41778 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Gm27552-201ENSMUST00000183351 62 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Gm27844-201ENSMUST00000183613 62 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Gm8574-201ENSMUST00000203207 924 ntBASIC12.08□□□□□ -0.48
Pbx1P41778 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Pbx1P41778 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.08□□□□□ -0.48
Pbx1P41778 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pbx1P41778 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Pbx1P41778 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Pbx1P41778 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pbx1P41778 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pbx1P41778 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.07□□□□□ -0.48
Pbx1P41778 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms