Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm15636-201ENSMUST00000119205 668 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm6441-201ENSMUST00000120983 696 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm27826-201ENSMUST00000175282 255 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm26957-201ENSMUST00000182645 977 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm18014-201ENSMUST00000183369 817 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm38233-201ENSMUST00000194259 807 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm37688-201ENSMUST00000195195 465 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm8643-201ENSMUST00000195228 625 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm38349-201ENSMUST00000195732 462 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm43117-201ENSMUST00000198531 379 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 AC124613.1-201ENSMUST00000198711 88 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm42599-201ENSMUST00000201308 469 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cxcl12P40224 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.61□□□□□ -0.55
Cxcl12P40224 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cxcl12P40224 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cxcl12P40224 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm11540-201ENSMUST00000117457 780 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm5510-201ENSMUST00000117826 486 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm11736-201ENSMUST00000121468 505 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm16288-201ENSMUST00000137940 367 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm7928-201ENSMUST00000181249 701 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm44498-201ENSMUST00000199509 111 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm44420-201ENSMUST00000203669 490 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Gm45893-201ENSMUST00000211899 247 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC11.6□□□□□ -0.55
Cxcl12P40224 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.6□□□□□ -0.55
Cxcl12P40224 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.6□□□□□ -0.55
Cxcl12P40224 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cxcl12P40224 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cxcl12P40224 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.59□□□□□ -0.55
Cxcl12P40224 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms