Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nedd8P29595 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.32□□□□□ -0.76
Nedd8P29595 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.32□□□□□ -0.76
Nedd8P29595 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm24845-201ENSMUST00000158034 109 ntBASIC10.32□□□□□ -0.76
Nedd8P29595 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.32□□□□□ -0.76
Nedd8P29595 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.32□□□□□ -0.76
Nedd8P29595 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Nedd8P29595 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.32□□□□□ -0.76
Nedd8P29595 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Nedd8P29595 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nedd8P29595 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nedd8P29595 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.31□□□□□ -0.76
Nedd8P29595 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.31□□□□□ -0.76
Nedd8P29595 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC10.31□□□□□ -0.76
Nedd8P29595 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Nedd8P29595 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Nedd8P29595 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm6222-202ENSMUST00000182143 629 ntBASIC10.31□□□□□ -0.76
Nedd8P29595 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Nedd8P29595 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Efna5-201ENSMUST00000076840 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.31□□□□□ -0.76
Nedd8P29595 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Nedd8P29595 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Nedd8P29595 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms