Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
BrafP28028 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.06□□□□□ -0.64
BrafP28028 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.06□□□□□ -0.64
BrafP28028 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.06□□□□□ -0.64
BrafP28028 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
BrafP28028 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.05□□□□□ -0.64
BrafP28028 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
BrafP28028 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
BrafP28028 Gm14208-201ENSMUST00000119645 678 ntBASIC11.05□□□□□ -0.64
BrafP28028 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
BrafP28028 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
BrafP28028 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
BrafP28028 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.05□□□□□ -0.64
BrafP28028 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.05□□□□□ -0.64
BrafP28028 Gm43002-201ENSMUST00000200310 155 ntBASIC11.05□□□□□ -0.64
BrafP28028 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BrafP28028 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
BrafP28028 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.05□□□□□ -0.64
BrafP28028 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.05□□□□□ -0.64
BrafP28028 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
BrafP28028 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
BrafP28028 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.04□□□□□ -0.64
BrafP28028 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 Gm11783-201ENSMUST00000119549 885 ntBASIC11.04□□□□□ -0.64
BrafP28028 Gm8566-201ENSMUST00000120174 465 ntBASIC11.04□□□□□ -0.64
BrafP28028 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.04□□□□□ -0.64
BrafP28028 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.04□□□□□ -0.64
BrafP28028 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Gm23085-201ENSMUST00000157849 293 ntBASIC11.04□□□□□ -0.64
BrafP28028 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.04□□□□□ -0.64
BrafP28028 Gm17040-202ENSMUST00000170597 889 ntBASIC11.04□□□□□ -0.64
BrafP28028 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Mir8093-201ENSMUST00000185043 137 ntBASIC11.04□□□□□ -0.64
BrafP28028 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.04□□□□□ -0.64
BrafP28028 Gm45575-201ENSMUST00000210283 548 ntBASIC11.04□□□□□ -0.64
BrafP28028 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.04□□□□□ -0.64
BrafP28028 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
BrafP28028 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Gm21811-201ENSMUST00000096485 930 ntBASIC11.04□□□□□ -0.64
BrafP28028 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
BrafP28028 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
BrafP28028 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms