Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Abcc4-201ENSMUST00000036554 5715 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Tnfrsf1aP25118 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm15566-201ENSMUST00000121130 590 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm8459-201ENSMUST00000162504 760 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Mir7070-201ENSMUST00000183657 86 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm28450-201ENSMUST00000187349 638 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm8342-201ENSMUST00000209839 757 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Gm5859-201ENSMUST00000165401 2324 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Tnfrsf1aP25118 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Gm13035-201ENSMUST00000117496 342 ntBASIC9.43□□□□□ -0.9
Tnfrsf1aP25118 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms