Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Rbm10-203ENSMUST00000084383 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cbx3P23198 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm37597-201ENSMUST00000191853 382 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Gm43818-201ENSMUST00000200605 466 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm10268-201ENSMUST00000085340 555 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm45797-201ENSMUST00000212759 1921 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cbx3P23198 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC10.24□□□□□ -0.77
Cbx3P23198 Gm37975-201ENSMUST00000195494 2099 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Gm44510-201ENSMUST00000206288 4532 ntBASIC10.24□□□□□ -0.77
Cbx3P23198 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Loxl3-202ENSMUST00000101257 3252 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cbx3P23198 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Dlgap4-202ENSMUST00000070782 3303 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Cbx3P23198 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm37843-201ENSMUST00000195213 2639 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm37873-201ENSMUST00000194571 2280 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Ptbp3-202ENSMUST00000102883 3409 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Ighg3-202ENSMUST00000223179 2414 ntAPPRIS P5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Cbx3P23198 Atg7-201ENSMUST00000032457 3761 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cbx3P23198 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10.23□□□□□ -0.77
Cbx3P23198 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm27243-201ENSMUST00000183964 521 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm6091-201ENSMUST00000098307 165 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm37731-201ENSMUST00000194545 2237 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cbx3P23198 Btn1a1-201ENSMUST00000041674 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.23□□□□□ -0.77
Cbx3P23198 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.23□□□□□ -0.77
Cbx3P23198 Ccdc138-201ENSMUST00000036576 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Sec31b-202ENSMUST00000111985 3548 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cbx3P23198 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Cbx3P23198 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cbx3P23198 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms