Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Cdx1P18111 Btrc-206ENSMUST00000224102 3037 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm42741-201ENSMUST00000201340 2278 ntBASIC9.16□□□□□ -0.94
Cdx1P18111 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC9.16□□□□□ -0.94
Cdx1P18111 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 2700049A03Rik-203ENSMUST00000149564 5763 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Cdx1P18111 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm13570-201ENSMUST00000140763 309 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm8885-201ENSMUST00000189382 598 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm37986-201ENSMUST00000193285 383 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Gm44405-201ENSMUST00000198952 126 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Gm43002-201ENSMUST00000200310 155 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.15□□□□□ -0.94
Cdx1P18111 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Cdx1P18111 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.15□□□□□ -0.94
Cdx1P18111 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Cdx1P18111 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC9.15□□□□□ -0.95
Cdx1P18111 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Cdx1P18111 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.15□□□□□ -0.95
Cdx1P18111 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.95
Cdx1P18111 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Cdx1P18111 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.14□□□□□ -0.95
Cdx1P18111 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm3287-205ENSMUST00000228893 1332 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm13875-201ENSMUST00000120162 282 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Cdx1P18111 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC9.14□□□□□ -0.95
Cdx1P18111 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Cdx1P18111 Gm27023-201ENSMUST00000182372 285 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm27341-201ENSMUST00000183570 106 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.14□□□□□ -0.95
Cdx1P18111 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Cdx1P18111 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms