Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc6P10629 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Hoxc6P10629 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm43152-201ENSMUST00000202495 1638 ntBASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.51□□□□□ -0.41
Hoxc6P10629 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Mir181d-201ENSMUST00000102383 72 ntBASIC12.51□□□□□ -0.41
Hoxc6P10629 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Snord55-201ENSMUST00000174939 79 ntBASIC12.51□□□□□ -0.41
Hoxc6P10629 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.51□□□□□ -0.41
Hoxc6P10629 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc6P10629 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc6P10629 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm23769-201ENSMUST00000104441 121 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm16547-201ENSMUST00000159474 293 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm18014-201ENSMUST00000183369 817 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm8384-201ENSMUST00000190905 704 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm12912-201ENSMUST00000121596 1381 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Hoxc6P10629 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.5□□□□□ -0.41
Hoxc6P10629 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Hoxc6P10629 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms