Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm14957-201ENSMUST00000121069 817 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm8459-201ENSMUST00000162504 760 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm21092-201ENSMUST00000178995 955 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm37458-201ENSMUST00000194055 410 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm6590-201ENSMUST00000203343 687 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 AC134254.4-201ENSMUST00000223086 370 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.54□□□□□ -0.56
Hoxb3P09026 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Hoxb3P09026 Mterf1a-201ENSMUST00000044746 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxb3P09026 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Mir704-201ENSMUST00000102106 77 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm13792-201ENSMUST00000121350 423 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Mup-ps15-201ENSMUST00000121741 539 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm11834-201ENSMUST00000122257 585 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm27390-201ENSMUST00000184516 176 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gm42452-201ENSMUST00000199749 617 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Hoxb3P09026 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 AC121567.1-201ENSMUST00000227213 842 ntBASIC11.53□□□□□ -0.56
Hoxb3P09026 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Hoxb3P09026 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Hoxb3P09026 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Hoxb3P09026 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Hoxb3P09026 Gm18300-201ENSMUST00000192792 1406 ntBASIC11.52□□□□□ -0.56
Hoxb3P09026 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms