Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm11836-201ENSMUST00000121022 441 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm12566-201ENSMUST00000121479 359 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm5970-201ENSMUST00000131638 1216 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Olfml3-204ENSMUST00000169286 874 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm7741-201ENSMUST00000181445 989 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm45856-201ENSMUST00000212752 416 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm19540-201ENSMUST00000221843 810 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 AC154848.1-201ENSMUST00000225451 846 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 AC154186.1-201ENSMUST00000227711 1597 ntBASIC11.48□□□□□ -0.57
PdgfrbP05622 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
PdgfrbP05622 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
PdgfrbP05622 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm25148-201ENSMUST00000104611 123 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.47□□□□□ -0.57
PdgfrbP05622 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm9353-201ENSMUST00000200472 604 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm43124-201ENSMUST00000201878 278 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Olfr584-201ENSMUST00000098210 964 ntBASIC11.47□□□□□ -0.57
PdgfrbP05622 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
PdgfrbP05622 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
PdgfrbP05622 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.46□□□□□ -0.57
PdgfrbP05622 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
PdgfrbP05622 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.46□□□□□ -0.57
PdgfrbP05622 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.46□□□□□ -0.57
PdgfrbP05622 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.46□□□□□ -0.57
PdgfrbP05622 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
PdgfrbP05622 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
PdgfrbP05622 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms