Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.83□□□□□ -0.68
Hcn1O88704 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Hcn1O88704 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.82□□□□□ -0.68
Hcn1O88704 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm13611-201ENSMUST00000118269 318 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm10051-201ENSMUST00000145209 414 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm10774-201ENSMUST00000188689 204 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm37835-201ENSMUST00000193305 361 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Gm7940-201ENSMUST00000218195 769 ntBASIC10.82□□□□□ -0.68
Hcn1O88704 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Hcn1O88704 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Hcn1O88704 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Hcn1O88704 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Hcn1O88704 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.81□□□□□ -0.68
Hcn1O88704 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm15432-201ENSMUST00000121106 195 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm15566-201ENSMUST00000121130 590 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.81□□□□□ -0.68
Hcn1O88704 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Hcn1O88704 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Hcn1O88704 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.81□□□□□ -0.68
Hcn1O88704 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.81□□□□□ -0.68
Hcn1O88704 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms