Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Gm25830-201ENSMUST00000158923 132 ntBASIC11.97□□□□□ -0.49
Psmc3O88685 Gm16030-201ENSMUST00000159098 603 ntBASIC11.97□□□□□ -0.49
Psmc3O88685 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.97□□□□□ -0.49
Psmc3O88685 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.97□□□□□ -0.49
Psmc3O88685 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Psmc3O88685 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Psmc3O88685 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.97□□□□□ -0.49
Psmc3O88685 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Psmc3O88685 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.97□□□□□ -0.49
Psmc3O88685 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Psmc3O88685 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Mir453-201ENSMUST00000104732 82 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Gm11500-201ENSMUST00000118237 601 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Gm11979-201ENSMUST00000119629 743 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Gm14993-201ENSMUST00000121180 164 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC11.96□□□□□ -0.49
Psmc3O88685 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm22846-201ENSMUST00000157706 270 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Gm5870-201ENSMUST00000196461 282 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Gm42599-201ENSMUST00000201308 469 ntBASIC11.96□□□□□ -0.49
Psmc3O88685 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.96□□□□□ -0.49
Psmc3O88685 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
Psmc3O88685 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Psmc3O88685 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Psmc3O88685 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.96□□□□□ -0.5
Psmc3O88685 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.96□□□□□ -0.5
Psmc3O88685 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.96□□□□□ -0.5
Psmc3O88685 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Psmc3O88685 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Psmc3O88685 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.95□□□□□ -0.5
Psmc3O88685 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Psmc3O88685 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Psmc3O88685 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Psmc3O88685 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.95□□□□□ -0.5
Psmc3O88685 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.95□□□□□ -0.5
Psmc3O88685 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Psmc3O88685 Gm14274-201ENSMUST00000117182 615 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Gm12218-201ENSMUST00000117666 399 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Psmc3O88685 Gm11578-201ENSMUST00000118530 459 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Gm11700-201ENSMUST00000119409 403 ntBASIC11.95□□□□□ -0.5
Psmc3O88685 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.95□□□□□ -0.5
Psmc3O88685 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms