Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm23647-201ENSMUST00000175042 109 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Rn5s-201ENSMUST00000177555 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s108-201ENSMUST00000177575 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s121-201ENSMUST00000177589 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s146-201ENSMUST00000177889 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm22109-201ENSMUST00000177995 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm22291-201ENSMUST00000178027 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s141-201ENSMUST00000178066 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm23284-201ENSMUST00000178069 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s100-201ENSMUST00000178106 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s111-201ENSMUST00000178203 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s105-201ENSMUST00000178499 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s149-201ENSMUST00000178520 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s103-201ENSMUST00000178755 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s123-201ENSMUST00000178804 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s142-201ENSMUST00000178820 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s144-201ENSMUST00000178859 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s139-201ENSMUST00000178975 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s134-201ENSMUST00000178983 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s136-201ENSMUST00000179080 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm25018-201ENSMUST00000179081 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s104-201ENSMUST00000179107 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s113-201ENSMUST00000179143 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s133-201ENSMUST00000179275 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s117-201ENSMUST00000179431 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm25212-201ENSMUST00000179432 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s138-201ENSMUST00000179476 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s122-201ENSMUST00000179500 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s143-201ENSMUST00000179542 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s107-201ENSMUST00000179704 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm26391-201ENSMUST00000179843 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s110-201ENSMUST00000179995 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s128-201ENSMUST00000180096 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 n-R5s124-201ENSMUST00000180334 119 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Mir8091-201ENSMUST00000183602 139 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm42751-201ENSMUST00000198065 559 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 BC080696-201ENSMUST00000202858 1218 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm45094-201ENSMUST00000207013 617 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm2448-201ENSMUST00000207080 559 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm26782-203ENSMUST00000227103 751 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 AC137871.1-201ENSMUST00000228278 475 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Gm24089-201ENSMUST00000093696 109 ntBASIC12.42□□□□□ -0.42
Trdmt1O55055 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trdmt1O55055 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trdmt1O55055 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm27956-201ENSMUST00000175604 260 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm9625-201ENSMUST00000180422 955 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm37782-201ENSMUST00000194879 678 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm7880-201ENSMUST00000203748 871 ntBASIC12.41□□□□□ -0.42
Trdmt1O55055 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.41□□□□□ -0.42
Trdmt1O55055 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trdmt1O55055 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms