Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm37458-201ENSMUST00000194055 410 ntBASIC11.03□□□□□ -0.64
Npc1O35604 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.03□□□□□ -0.64
Npc1O35604 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.03□□□□□ -0.64
Npc1O35604 Gm44008-201ENSMUST00000204345 412 ntBASIC11.03□□□□□ -0.64
Npc1O35604 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.03□□□□□ -0.64
Npc1O35604 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.03□□□□□ -0.64
Npc1O35604 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.03□□□□□ -0.64
Npc1O35604 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 AC123738.2-201ENSMUST00000223791 1899 ntBASIC11.03□□□□□ -0.64
Npc1O35604 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Npc1O35604 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Erich3-203ENSMUST00000189969 3460 ntBASIC11.03□□□□□ -0.64
Npc1O35604 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Npc1O35604 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.02□□□□□ -0.64
Npc1O35604 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.02□□□□□ -0.64
Npc1O35604 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Npc1O35604 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.02□□□□□ -0.65
Npc1O35604 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.02□□□□□ -0.65
Npc1O35604 Gm8302-201ENSMUST00000119217 852 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Gm1848-201ENSMUST00000120711 789 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.02□□□□□ -0.65
Npc1O35604 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.02□□□□□ -0.65
Npc1O35604 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Gm20495-201ENSMUST00000173902 235 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Npc1O35604 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC11.02□□□□□ -0.65
Npc1O35604 Gm17877-201ENSMUST00000192578 814 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Gm43520-201ENSMUST00000197996 164 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Gm45219-201ENSMUST00000205602 465 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Npc1O35604 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.02□□□□□ -0.65
Npc1O35604 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Npc1O35604 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.02□□□□□ -0.65
Npc1O35604 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Npc1O35604 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Npc1O35604 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Npc1O35604 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms