Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Ighv1-70-201ENSMUST00000196509 351 ntBASIC17.06■□□□□ 0.32
Polr1aO35134 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm5738-201ENSMUST00000206016 779 ntBASIC17.06■□□□□ 0.32
Polr1aO35134 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Polr1aO35134 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Polr1aO35134 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Polr1aO35134 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Polr1aO35134 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm6560-201ENSMUST00000198588 1591 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Polr1aO35134 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm23582-201ENSMUST00000158530 139 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Gm16228-201ENSMUST00000162286 809 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm9409-201ENSMUST00000197017 316 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm7242-201ENSMUST00000221134 705 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Gm5424-201ENSMUST00000053865 1240 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Polr1aO35134 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC17.05■□□□□ 0.32
Polr1aO35134 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC17.05■□□□□ 0.32
Polr1aO35134 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC17.05■□□□□ 0.32
Polr1aO35134 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm43482-201ENSMUST00000202797 1861 ntBASIC17.05■□□□□ 0.32
Polr1aO35134 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Polr1aO35134 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Gm15746-201ENSMUST00000120684 1027 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 Gm14639-201ENSMUST00000120850 866 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC17.04■□□□□ 0.32
Polr1aO35134 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Gm44663-201ENSMUST00000206898 3150 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Gm12009-201ENSMUST00000121361 1100 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC17.04■□□□□ 0.32
Polr1aO35134 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 AC241616.1-201ENSMUST00000213741 166 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC17.04■□□□□ 0.32
Polr1aO35134 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC17.04■□□□□ 0.32
Polr1aO35134 Gm37264-201ENSMUST00000194916 2192 ntBASIC17.04■□□□□ 0.32
Polr1aO35134 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Polr1aO35134 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Gm45206-201ENSMUST00000206885 2285 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Polr1aO35134 Gm14231-201ENSMUST00000120090 592 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Gm6216-201ENSMUST00000182390 687 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC17.03■□□□□ 0.32
Polr1aO35134 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Polr1aO35134 Gm30055-201ENSMUST00000203175 803 ntBASIC17.03■□□□□ 0.32
Polr1aO35134 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms