Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm12716-201ENSMUST00000120606 1354 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm8725-201ENSMUST00000221829 1333 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hfm1D3Z4R1 Gm8684-201ENSMUST00000195078 1564 ntBASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Gm12435-201ENSMUST00000118949 1016 ntBASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Gm37597-201ENSMUST00000191853 382 ntBASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Gm38038-201ENSMUST00000193803 259 ntBASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Gm44755-201ENSMUST00000207830 2102 ntBASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hfm1D3Z4R1 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Mir598-201ENSMUST00000102094 79 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm13777-201ENSMUST00000118208 345 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm14633-201ENSMUST00000121152 470 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm15373-201ENSMUST00000121495 214 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm13505-201ENSMUST00000121666 817 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm24346-201ENSMUST00000158712 194 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm7211-201ENSMUST00000172692 1118 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm25591-201ENSMUST00000177317 94 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm5311-201ENSMUST00000203518 709 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm44908-201ENSMUST00000208610 266 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gm8618-201ENSMUST00000097570 432 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 CT025624.1-201ENSMUST00000224007 2700 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 AC109214.1-201ENSMUST00000219520 1372 ntBASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hfm1D3Z4R1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm14997-201ENSMUST00000119232 636 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm14231-201ENSMUST00000120090 592 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 Gm5274-201ENSMUST00000182641 1003 ntBASIC15.6■□□□□ 0.09
Hfm1D3Z4R1 AC155300.1-201ENSMUST00000219134 480 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms