Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm11475-201ENSMUST00000118482 476 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm12745-201ENSMUST00000121767 214 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 CT030652.1-201ENSMUST00000227377 1235 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm11979-201ENSMUST00000119629 743 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm25545-201ENSMUST00000122673 323 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Mir8091-201ENSMUST00000183602 139 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Gm18042-201ENSMUST00000219887 790 ntBASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Scn3aA2ASI5 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Scn3aA2ASI5 Mir671-201ENSMUST00000102432 98 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Ighv5-8-202ENSMUST00000191967 337 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm45258-201ENSMUST00000210042 853 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Scn3aA2ASI5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm5555-201ENSMUST00000120352 1111 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm8170-201ENSMUST00000218581 945 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 BC106175-202ENSMUST00000219344 1213 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Scn3aA2ASI5 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms