Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
H2afb2S4R1M3 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm12419-201ENSMUST00000116649 636 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm4654-201ENSMUST00000183305 982 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H2afb2S4R1M3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Snord17-201ENSMUST00000104526 238 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm16219-201ENSMUST00000120096 274 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Mir5120-201ENSMUST00000175020 78 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm23694-201ENSMUST00000179335 110 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm9555-201ENSMUST00000200908 583 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
H2afb2S4R1M3 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
H2afb2S4R1M3 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms