Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm5714-201ENSMUST00000197343 566 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 AC154532.1-201ENSMUST00000227860 965 ntBASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
H2afb3S4R1G7 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm14724-201ENSMUST00000118400 537 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm8566-201ENSMUST00000120174 465 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm37666-201ENSMUST00000194110 866 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm2965-201ENSMUST00000198365 343 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm6108-201ENSMUST00000208365 367 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm45331-201ENSMUST00000209868 554 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm45575-201ENSMUST00000210283 548 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
H2afb3S4R1G7 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Fam198b-202ENSMUST00000118853 6729 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm12380-201ENSMUST00000119012 544 ntBASIC10.17□□□□□ -0.78
H2afb3S4R1G7 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC10.17□□□□□ -0.78
H2afb3S4R1G7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms