Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Chaf1aQ9QWF0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Mir877-201ENSMUST00000104738 85 ntBASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm11500-201ENSMUST00000118237 601 ntBASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm15207-201ENSMUST00000119259 442 ntBASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm20495-201ENSMUST00000173902 235 ntBASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Chaf1aQ9QWF0 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Gm26083-201ENSMUST00000157904 193 ntBASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Gm4857-201ENSMUST00000192718 785 ntBASIC12.65□□□□□ -0.38
Chaf1aQ9QWF0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms