Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm4271-201ENSMUST00000174444 973 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm6244-201ENSMUST00000178732 841 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm44958-201ENSMUST00000203734 736 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm39404-201ENSMUST00000216350 313 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm6180-201ENSMUST00000065243 498 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Mid1-205ENSMUST00000112105 3974 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trem1Q9JKE2 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Oprl1-201ENSMUST00000071585 2999 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm12314-201ENSMUST00000118104 538 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm11918-201ENSMUST00000121660 179 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm44405-201ENSMUST00000198952 126 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Tcn2-202ENSMUST00000109988 1957 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 A430046D13Rik-201ENSMUST00000180477 1997 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Tmem63a-205ENSMUST00000161523 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm37593-201ENSMUST00000191669 3254 ntBASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 4933427D06Rik-204ENSMUST00000168837 2467 ntTSL 5 BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Slc28a2-202ENSMUST00000110524 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trem1Q9JKE2 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm12036-201ENSMUST00000120008 530 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm14928-201ENSMUST00000120198 477 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm37597-201ENSMUST00000191853 382 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm42693-201ENSMUST00000196779 631 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 Gm43179-201ENSMUST00000198797 275 ntBASIC10.05□□□□□ -0.8
Trem1Q9JKE2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms