Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf6Q9DBU5 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf6Q9DBU5 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.11□□□□□ -0.47
Rnf6Q9DBU5 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm15881-201ENSMUST00000148792 942 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm24992-201ENSMUST00000157412 130 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm18827-201ENSMUST00000188341 790 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm43916-201ENSMUST00000205062 967 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf6Q9DBU5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm13611-201ENSMUST00000118269 318 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm20426-201ENSMUST00000173657 440 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rnf6Q9DBU5 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.08□□□□□ -0.47
Rnf6Q9DBU5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf6Q9DBU5 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf6Q9DBU5 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf6Q9DBU5 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Rnf6Q9DBU5 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf6Q9DBU5 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms