Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Chmp2aQ9DB34 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Chmp2aQ9DB34 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm15615-201ENSMUST00000118876 198 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm15131-201ENSMUST00000119124 595 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm11246-201ENSMUST00000120880 345 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm21092-201ENSMUST00000178995 955 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm27910-201ENSMUST00000185004 107 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.77□□□□□ -0.53
Chmp2aQ9DB34 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.76□□□□□ -0.53
Chmp2aQ9DB34 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms