Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm27844-201ENSMUST00000183613 62 ntBASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm5733-201ENSMUST00000190232 939 ntBASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm33366-201ENSMUST00000195583 3827 ntBASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Fgd1-202ENSMUST00000112685 3240 ntTSL 5 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gtf3c6Q9D8P7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Ddx24-206ENSMUST00000221211 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Gtf3c6Q9D8P7 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm29499-201ENSMUST00000189151 486 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm28329-201ENSMUST00000191208 689 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm29171-201ENSMUST00000191397 486 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Adgrv1-214ENSMUST00000224088 1492 ntBASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gtf3c6Q9D8P7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm26541-201ENSMUST00000181866 3973 ntTSL 5 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm13035-201ENSMUST00000117496 342 ntBASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm11893-201ENSMUST00000117829 491 ntBASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.26□□□□□ -0.45
Gtf3c6Q9D8P7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms