Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Chmp4cQ9D7F7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm23200-201ENSMUST00000104379 132 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm13461-201ENSMUST00000120980 662 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm5733-201ENSMUST00000190232 939 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm37246-201ENSMUST00000192665 835 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm6722-201ENSMUST00000221586 390 ntBASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Chmp4cQ9D7F7 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm7150-201ENSMUST00000122032 981 ntBASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chmp4cQ9D7F7 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms