Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gm38117-201ENSMUST00000194653 939 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gm45598-202ENSMUST00000210719 986 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Krt88Q9CPR6 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm7940-201ENSMUST00000218195 769 ntBASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Krt88Q9CPR6 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Spata33-207ENSMUST00000212760 4074 ntBASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Krt88Q9CPR6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms