Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Prpf8Q99PV0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm25562-201ENSMUST00000104608 133 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm42511-201ENSMUST00000196160 234 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm44323-201ENSMUST00000198689 129 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm17214-201ENSMUST00000164501 541 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm23694-201ENSMUST00000179335 110 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Mir6973a-201ENSMUST00000183646 78 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm29763-201ENSMUST00000205306 616 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.28□□□□□ -0.92
Prpf8Q99PV0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Gm23675-201ENSMUST00000157311 125 ntBASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Gm24992-201ENSMUST00000157412 130 ntBASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Prpf8Q99PV0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Prpf8Q99PV0 Gm27177-202ENSMUST00000183514 2703 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms