Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Scrt1Q99M85 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm15610-201ENSMUST00000120584 195 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Ighv1-2-201ENSMUST00000195325 378 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Trav11n-201ENSMUST00000200113 343 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm29763-201ENSMUST00000205306 616 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm7082-201ENSMUST00000209880 969 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm40879-201ENSMUST00000220759 612 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Gm21759-201ENSMUST00000178345 1828 ntBASIC9.95□□□□□ -0.82
Scrt1Q99M85 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Scrt1Q99M85 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm5909-201ENSMUST00000119768 1281 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm12712-201ENSMUST00000120676 801 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm11244-201ENSMUST00000121243 237 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm26368-201ENSMUST00000157826 118 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm9916-201ENSMUST00000192943 1228 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm9136-201ENSMUST00000193368 454 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Gm6108-201ENSMUST00000208365 367 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC153962.2-201ENSMUST00000219417 550 ntBASIC9.94□□□□□ -0.82
Scrt1Q99M85 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Scrt1Q99M85 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.94□□□□□ -0.82
Scrt1Q99M85 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms