Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Chmp1b1Q99LU0 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm13916-201ENSMUST00000117368 628 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm13035-201ENSMUST00000117496 342 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm15515-201ENSMUST00000117827 822 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm13461-201ENSMUST00000120980 662 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm12566-201ENSMUST00000121479 359 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm18734-201ENSMUST00000172937 808 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm27530-201ENSMUST00000184096 98 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm5982-201ENSMUST00000196234 512 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm6905-201ENSMUST00000205729 511 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Ntng1-201ENSMUST00000051253 327 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm38055-201ENSMUST00000195353 2217 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Chmp1b1Q99LU0 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm23200-201ENSMUST00000104379 132 ntBASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm13263-201ENSMUST00000121271 838 ntBASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm8199-201ENSMUST00000121323 823 ntBASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Mir5120-201ENSMUST00000175020 78 ntBASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC10.69□□□□□ -0.7
Chmp1b1Q99LU0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms