Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm23251-201ENSMUST00000103773 110 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm6905-201ENSMUST00000205729 511 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm7940-201ENSMUST00000218195 769 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.91□□□□□ -0.5
Usp11Q99K46 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Usp11Q99K46 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Usp11Q99K46 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Usp11Q99K46 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm13809-201ENSMUST00000117921 597 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm43002-201ENSMUST00000200310 155 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Gm1821-202ENSMUST00000227415 750 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Ntng1-201ENSMUST00000051253 327 ntBASIC11.9□□□□□ -0.5
Usp11Q99K46 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Usp11Q99K46 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Usp11Q99K46 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Usp11Q99K46 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.9□□□□□ -0.51
Usp11Q99K46 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC11.9□□□□□ -0.51
Usp11Q99K46 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Usp11Q99K46 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Usp11Q99K46 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Usp11Q99K46 Gm43289-201ENSMUST00000200537 1475 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Btrc-209ENSMUST00000224478 2194 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm11960-201ENSMUST00000122068 925 ntBASIC11.89□□□□□ -0.51
Usp11Q99K46 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.89□□□□□ -0.51
Usp11Q99K46 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Usp11Q99K46 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Usp11Q99K46 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms