Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm14585-201ENSMUST00000120713 634 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm17391-201ENSMUST00000171036 126 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm3508-201ENSMUST00000186012 792 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm37981-201ENSMUST00000194280 535 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm44008-201ENSMUST00000204345 412 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm45550-201ENSMUST00000209380 946 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdha3Q91Y16 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Pcdha3Q91Y16 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm11246-201ENSMUST00000120880 345 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm19459-201ENSMUST00000176240 835 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.83□□□□□ -0.52
Pcdha3Q91Y16 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms