Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 BC043934-202ENSMUST00000185694 2356 ntBASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdhb6Q91XZ4 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm15573-201ENSMUST00000119487 540 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm15432-201ENSMUST00000121106 195 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm5468-202ENSMUST00000227851 682 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdhb6Q91XZ4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Pcdhb6Q91XZ4 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 B9d1os-201ENSMUST00000137010 674 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Mir7051-201ENSMUST00000184167 73 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Gm5302-201ENSMUST00000202130 796 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.58□□□□□ -0.56
Pcdhb6Q91XZ4 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms