Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm22334-201ENSMUST00000158070 133 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm45118-201ENSMUST00000208928 825 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Pcdhga4Q91XY4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm21092-201ENSMUST00000178995 955 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm5523-201ENSMUST00000180415 997 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm9136-201ENSMUST00000193368 454 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm45398-201ENSMUST00000210561 165 ntBASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pcdhga4Q91XY4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pcdhga4Q91XY4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.16□□□□□ -0.62
Pcdhga4Q91XY4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.16□□□□□ -0.62
Pcdhga4Q91XY4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pcdhga4Q91XY4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms