Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm22711-201ENSMUST00000116890 133 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm15352-201ENSMUST00000118696 270 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm23699-201ENSMUST00000158835 135 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm37981-201ENSMUST00000194280 535 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm8574-201ENSMUST00000203207 924 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trim29Q8R2Q0 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim29Q8R2Q0 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.9□□□□□ -0.35
Trim29Q8R2Q0 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Mir7686-201ENSMUST00000200604 57 ntBASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim29Q8R2Q0 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm4294-201ENSMUST00000105169 614 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 B9d1os-201ENSMUST00000137010 674 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm22144-201ENSMUST00000157402 102 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm19353-201ENSMUST00000184561 445 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm43186-201ENSMUST00000198130 824 ntBASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.88□□□□□ -0.35
Trim29Q8R2Q0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms