Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm24159-201ENSMUST00000175264 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25299-201ENSMUST00000175283 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23798-201ENSMUST00000175560 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23802-201ENSMUST00000175565 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25708-201ENSMUST00000177687 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm24370-201ENSMUST00000178007 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23049-201ENSMUST00000178068 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm28019-201ENSMUST00000178138 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25571-201ENSMUST00000178322 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25355-201ENSMUST00000178456 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm24975-201ENSMUST00000178492 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23189-201ENSMUST00000178954 102 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm26272-201ENSMUST00000179241 132 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm25100-201ENSMUST00000179750 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm23064-201ENSMUST00000179866 101 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm37852-201ENSMUST00000193027 350 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm43969-201ENSMUST00000204833 535 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm29763-201ENSMUST00000205306 616 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Chmp7Q8R1T1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Erich3-203ENSMUST00000189969 3460 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm12986-201ENSMUST00000119037 967 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm26119-201ENSMUST00000175601 104 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm31274-201ENSMUST00000197356 229 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm43249-201ENSMUST00000200464 458 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Chmp7Q8R1T1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Snord17-201ENSMUST00000104526 238 ntBASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Gm11952-201ENSMUST00000121172 821 ntBASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Chmp7Q8R1T1 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms