Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Prdx6b-201ENSMUST00000057072 2885 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm12516-201ENSMUST00000120819 385 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm12208-201ENSMUST00000122004 163 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm9089-201ENSMUST00000122027 526 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm22442-201ENSMUST00000157256 144 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm7593-201ENSMUST00000187246 644 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm45219-201ENSMUST00000205602 465 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Smad2-201ENSMUST00000025453 2410 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Gfm2-208ENSMUST00000161639 3157 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hoxc12Q8K5B8 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Syncrip-207ENSMUST00000174269 3286 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 AC158355.1-201ENSMUST00000215895 1705 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm11451-201ENSMUST00000118946 630 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm11667-201ENSMUST00000119828 486 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm11836-201ENSMUST00000121022 441 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Mir8115-201ENSMUST00000184992 119 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm9645-201ENSMUST00000197131 792 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm43058-201ENSMUST00000197645 625 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Gm5178-201ENSMUST00000219380 898 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 AC165260.2-203ENSMUST00000224237 336 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.6□□□□□ -0.87
Hoxc12Q8K5B8 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms