Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm15198-201ENSMUST00000117283 177 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm13461-201ENSMUST00000120980 662 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.06□□□□□ -0.8
ShfQ8CG80 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm4482-201ENSMUST00000200876 742 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm43630-201ENSMUST00000201550 776 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm5996-201ENSMUST00000211110 718 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm6082-201ENSMUST00000215204 454 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm18730-201ENSMUST00000218038 343 ntBASIC10.06□□□□□ -0.8
ShfQ8CG80 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.06□□□□□ -0.8
ShfQ8CG80 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ShfQ8CG80 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm4294-201ENSMUST00000105169 614 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm12501-201ENSMUST00000119163 529 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm8199-201ENSMUST00000121323 823 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm15549-201ENSMUST00000121595 622 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm9540-201ENSMUST00000188230 478 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm43058-201ENSMUST00000197645 625 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm43179-201ENSMUST00000198797 275 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC10.05□□□□□ -0.8
ShfQ8CG80 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm21811-201ENSMUST00000096485 930 ntBASIC10.05□□□□□ -0.8
ShfQ8CG80 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
ShfQ8CG80 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
ShfQ8CG80 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ShfQ8CG80 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.04□□□□□ -0.8
ShfQ8CG80 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms