Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco1Q8CEZ1 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Smco1Q8CEZ1 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Smco1Q8CEZ1 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm10434-201ENSMUST00000101158 471 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm23061-201ENSMUST00000102348 116 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm13316-201ENSMUST00000140537 691 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm9230-201ENSMUST00000188228 532 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm43818-201ENSMUST00000200605 466 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 AC154528.2-201ENSMUST00000228432 3023 ntBASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smco1Q8CEZ1 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 AC124732.3-201ENSMUST00000221835 1765 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm9002-201ENSMUST00000178437 499 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm9908-201ENSMUST00000211534 448 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.22□□□□□ -0.77
Smco1Q8CEZ1 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms