Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm11793-201ENSMUST00000120433 981 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm37489-201ENSMUST00000191883 159 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm43962-201ENSMUST00000203898 190 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm45598-202ENSMUST00000210719 986 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.16□□□□□ -0.62
Ccdc28bQ8CEG5 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm37301-201ENSMUST00000195412 568 ntBASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm44008-201ENSMUST00000204345 412 ntBASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm30285-201ENSMUST00000214614 422 ntBASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Atxn7l3-203ENSMUST00000107134 3712 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc28bQ8CEG5 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.15□□□□□ -0.63
Ccdc28bQ8CEG5 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc28bQ8CEG5 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Ccdc28bQ8CEG5 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc28bQ8CEG5 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc28bQ8CEG5 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gm5187-201ENSMUST00000117317 991 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Snora78-201ENSMUST00000158630 128 ntBASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc28bQ8CEG5 Gm38117-201ENSMUST00000194653 939 ntBASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms